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Albert Vilella, PhD.
@albertvilella.bsky.social
Bioinformatics Scientist / Next Generation Sequencing / Single Cell and spatial biology / Next Generation Proteomics / Liquid Biopsy/ SynBio / Compute Acceleration // albertvilella.substack.com
2.8k followers6k following483 posts
AValbertvilella.bsky.social

So ChatGPT4 is able to describe the relevant tool or section of the VCF format (bcftools csq). I wouldn't have used the term "meta-information section", rather POS or position of the variant consequence.

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AValbertvilella.bsky.social

ChatGPT4 continues: "This annotation can provide information such as the gene name, transcript ID, amino acid change, and consequence type of the variant." Also a useful addition to the explanation.

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Albert Vilella, PhD.
@albertvilella.bsky.social
Bioinformatics Scientist / Next Generation Sequencing / Single Cell and spatial biology / Next Generation Proteomics / Liquid Biopsy/ SynBio / Compute Acceleration // albertvilella.substack.com
2.8k followers6k following483 posts