GC
Gemma C. Atkinson
@gemmaatkinson.bsky.social
Lecturer & group leader in Lund University. Computational microbiologist, mostly working on toxin-antitoxin systems, ribosomes and bacterial defence against phages. Director of the LU-Fold protein structure prediction infrastructure of LU.
Atkinson-lab.com
350 followers356 following19 posts
Drop me an email if you want specific info and I’ll put you in touch with the group members with the know-how 👍
We are doing similar approaches here in Oz. Are you still using the original MSA step or have you looked into Openfold?
That’s very kind- thank you! We can run AF2 very efficiently on our cluster for single cases but I was more specifically interested in your experience with large-scale predictions. Will email soon!
GC
Gemma C. Atkinson
@gemmaatkinson.bsky.social
Lecturer & group leader in Lund University. Computational microbiologist, mostly working on toxin-antitoxin systems, ribosomes and bacterial defence against phages. Director of the LU-Fold protein structure prediction infrastructure of LU.
Atkinson-lab.com
350 followers356 following19 posts