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Sean Gibbons 🦠💩
@gibbological.bsky.social
microbiome science | associate professor at the Institute for Systems Biology (ISB) | affiliate prof at the University of Washington | ecology, evolution, and systems biology of 💩 🦠 | 🏳️‍🌈 he/him | lab website: gibbons.isbscience.org
595 followers289 following124 posts
Reposted by Sean Gibbons 🦠💩
MVmicrobiomevif.bsky.social
SGgibbological.bsky.social

🙏

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SGgibbological.bsky.social

TLDR: we found that theoretical ecology may be relevant to enteric infections. We identified a new mechanistic driver of alpha diversity variation in the gut: bowel length and Island Biogeography Theory. Finally, if you're short, don't sweat it, just eat your fruits and veggies!

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SGgibbological.bsky.social

💯

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SGgibbological.bsky.social

oh, interesting! looking forward to seeing the follow-up work in more complex communities :)

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SGgibbological.bsky.social

really interesting. kind of scary that the host chooses a less-fermentable diet. makes sense from a satiety/behavior perspective, but definitely pushes mice (and maybe us?) away from the healthier option!

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SGgibbological.bsky.social

MEDI was a really tricky method to implement, and it took years to get it working well. Hats off to the incredibly talented @cdiener.com for building such a useful tool 🎩🤩

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SGgibbological.bsky.social

Finally, MEDI could potentially be combined with other data-driven approaches to tracking dietary intake, like amplicon-based methods developed by the David Lab (doi.org/10.1073/pnas...nature.com/articles/s41... ).

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SGgibbological.bsky.social

We hope this method will be useful, and open up new avenues for tracking human dietary intake. There are several caveats, like the fact that we cannot capture foods that do not have a DNA signature (e.g., processed sugars). See the preprint for more on this point.

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Profile banner
SG
Sean Gibbons 🦠💩
@gibbological.bsky.social
microbiome science | associate professor at the Institute for Systems Biology (ISB) | affiliate prof at the University of Washington | ecology, evolution, and systems biology of 💩 🦠 | 🏳️‍🌈 he/him | lab website: gibbons.isbscience.org
595 followers289 following124 posts