Getting great results from CCS and Hi-C scaffolding to generate DTOL reference genomes, e.g. with new YaHS scaffolding software: academic.oup.com/bioinformati...

YaHS: yet another Hi-C scaffolding tool

AbstractSummary. We present YaHS, a user-friendly command-line tool for the construction of chromosome-scale scaffolds from Hi-C data. It can be run with a

Also impressed with Herro error-corrected ONT data to help resolve very complex repetitive centromeric regions: github.com/lbcb-sci/herro