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Frederic Mentink-Vigier
@dnpfred.bsky.social
Research Faculty at the National High Magnetic Field Laboratory in Tallahassee. Keen on #compchem, spin dynamics, #MASDNP, and anything with electrons and nuclei #NMR. Linux user, Matlab kind of expert, Orca and OpenMM newbie.
76 followers161 following103 posts
FMdnpfred.bsky.social
FMdnpfred.bsky.social

When you think it's over, it's not. There is still a lot of heat to dissipate in the golf of Mexico. www.nhc.noaa.gov/gtwo.php?bas... Orange is not a track, it is the development area.

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Reposted by Frederic Mentink-Vigier
Ffaccts-orca.bsky.social

NMR properties are an important part of the spectroscopic toolbox of ORCA 6 (@faccts-orca.bsky.socialdoi.org/10.1021/acs....#ORCAqc#ORCA6#NMR#ChemSky#CompChem

1.3 Å Crystal Structure of E. coli Peptidyl–Prolyl Isomerase B with Uniform Substitution of Valine by (2S,3S)-4-Fluorovaline Reveals Structure Conservation and Multiple Staggered Rotamers of CH2F Groups
1.3 Å Crystal Structure of E. coli Peptidyl–Prolyl Isomerase B with Uniform Substitution of Valine by (2S,3S)-4-Fluorovaline Reveals Structure Conservation and Multiple Staggered Rotamers of CH2F Groups

(2S,3S)-4-Fluorovaline (FVal) is an analogue of valine, where a single CH3 group is substituted by a CH2F group. In the absence of valine, E. coli valyl-tRNA synthetase uses FVal as a substitute, enabling the production of proteins uniformly labeled with FVal. Here, we describe the production and analysis of E. coli peptidyl–prolyl isomerase B where all 16 valine residues have been replaced by FVal synthesized with a 13C-labeled CH2F group. Although the melting temperature is lower by about 11 °C relative to the wild-type protein, the three-dimensional protein structure is almost completely conserved, as shown by X-ray crystallography. The CH2F groups invariably populate staggered rotamers. Most CH2F groups populate two different rotamers. The increased space requirement of fluorine versus hydrogen does not prohibit rotamers that position fluorine next to a backbone carbonyl carbon. 19F NMR spectra show a signal dispersion over 25 ppm. The most high-field shifted 19F resonances correlate with large 3JHF coupling constants, confirming the impact of the γ-gauche effect on the signal dispersion. The present work is the second experimental verification of the effect and extends its validity to fluorovaline. The abundance of valine in proteins and structural conservation with FVal renders this valine analogue attractive for probing proteins by 19F NMR spectroscopy.

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FMdnpfred.bsky.social

Thank Cady, some of us left town to avoid the worst.

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FMdnpfred.bsky.social

yeah it will be really bad...

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FMdnpfred.bsky.social

Speechless

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FMdnpfred.bsky.social

Seriously, people must be warned?

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Reposted by Frederic Mentink-Vigier
RWrwmartin.bsky.social

I had a great visit to the MagLab in Tallahassee. I saw a lot of weird magnet designs and new probes. I hope I can stay longer next time-lots of neat experiments to do.

The 900 MHz ultra wide bore magnet. It is very tall and has a big ladder next to it to reach the platform.
Probes for the 900 MHz ultra wide bore magnet. There are 9 of them in a rack, they are about as tall as a person.
Ilya standing on top of the series connected hybrid magnet. He is on a stainless steel platform in front of a plexiglass barrier with a lot of high power electrical connections behind it.
A broken magnet made up of a stack of superconducting discs. The whole stack is sheared in half.
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FM
Frederic Mentink-Vigier
@dnpfred.bsky.social
Research Faculty at the National High Magnetic Field Laboratory in Tallahassee. Keen on #compchem, spin dynamics, #MASDNP, and anything with electrons and nuclei #NMR. Linux user, Matlab kind of expert, Orca and OpenMM newbie.
76 followers161 following103 posts