Thanks for the replies. Social media win: Lauric Ferrat showed me the way: bsky.app/profile/lcpi...
I think the problem was I was trying with the new "fine-grained tokens" rather than the classic "personal access tokens" -- the below works fine for private repos! system("git clone [https://]<personal_access_token>@github.com/repo.git") Many thanks to Lauric Ferrat for pointing this out to me
As I move to RAP-only for UK Biobank I find I am increasingly using GitHub rather than random locations on my servers to store/share code... this is a very positive side-effect in the long term! Does anyone know if I can directly access code on a private GitHub organsation repo from a RAP worker?
It shouldn't feel like such an achievement to navigate both T1 (expenses claims) and Key Travel (booked flights, hotel, and train for GSA 2024) in one morning. Well done me ๐
Great idea. Honour to be included! Thank you. BSky really taking off now
I am recruiting a PhD student, co-supervised with George Davey-Smith, Gareth Hawkes and Laura Corbin to study trait residualized for known genetic influences, please Apply! gw4biomed.ac.uk/shining-a-li...
{ukbrapR} R package update Specifically designed to make working with UK Biobank diagnoses in the Research Analysis Platform easy, fast, and reproducible. In v0.2.3 * HES searches can include ICD9 codes - thanks Kate Ruth * Thanks to Lauric Ferrat for help with bugs! github.com/lcpilling/uk...
R functions to use in the UK Biobank Research Analysis Platform (RAP) - lcpilling/ukbrapR