Researchers uncover new disease-linked microbial species through pan-body microbiome analysis 🔬🦠🌍 www.news-medical.net/news/2024100...#Microbiome#Disease#Therapeutics#Diagnostics#GutHealth#Comorbidity#Health#AMR#Microbiota#Metagenomics
Researchers in Germany conducted a pan-body microbiome analysis, uncovering new microbial species and potential therapies linked to diseases, with implications for diagnostic and therapeutic advanceme...
Long-read metagenomics empowers precise tracking of bacterial strains and their genomic changes after fecal microbiota transplantation www.biorxiv.org/content/10.1101/2024.09.30.615906v1
Fecal microbiota transplantation (FMT) has revolutionized the treatment of recurrent Clostridioides
Long-read metagenomics empowers precise tracking of bacterial strains and their genomic changes after fecal microbiota transplantation www.biorxiv.org/content/10.1101/2024.09.30.615906v1
Fecal microbiota transplantation (FMT) has revolutionized the treatment of recurrent Clostridioides
Taxometer: Improving taxonomic classification of metagenomics contigs https://www.nature.com/articles/s41467-024-52771-yhttps://github.com/RasmussenLab/vamb
Taxometer: Improving taxonomic classification of metagenomics contigs www.nature.com/articles/s41...#jcampubs
Taxonomic classification of DNA sequences is typically performed on each sequence individually. Here the authors present a deep learning-based method that utilizes information across a dataset to enha...
Given the high levels of standing diversity in our pond species (eg pre-existing strain variation), adaptive variants could arise on different genome backgrounds. To distinguish recombination-driven gene-sweeps from homoplasy-driven soft sweeps will require other methods (sorry metagenomics). 16/n
🚨 Only a few spots left! 🚨 Don’t miss out on the Environmental Metagenomics course with @luispedrocoelho.bsky.socialwww.physalia-courses.org/courses-work...
What softwares are people using these days to pull single copy marker genes out of MAGs? (looking for modern alternatives to phylosift) #metagenomics#microbiomes 🧬🖥️