Benchmarks on DNA extraction methods for long-read #metagenomicdoi.org/10.1099/acmi...
Metagenomics has been transformative in our understanding of the diversity and function of soil microbial communities. Applying long read sequencing to whole genome shotgun metagenomics has the potent...
Strainy: phasing and assembly of strain haplotypes from long-read metagenome sequencing www.nature.com/articles/s41...github.com/katerinakaza...
This work presents Strainy, a long-read metagenome assembler that allows the identification of strain distributions and mutational patterns in environmental metagenomes.
I'm finding better results for new papers here versus on X. Maybe because it's more condensed on MicrobiomeSky?
If you ever need a hand catching lizards around town, definitely let me know!
I've found an established anole population in the Japanese Friendship Garden in Balboa Park, and there is another group in the SD Zoo in the African plants by the penguin display. I've got plenty of photos, and also caught a couple by hand 😅🦎
If you study an endangered vertebrate species and plan on sequencing their #genome#PacBio#herpetology#reptiles#amphibiansprograms.pacb.com/l/1652/2024-...
Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur (https://github.com/treangenlab/lemurhttps://github.com/treangenlab/magnethttps://www.biorxiv.org/content/10.1101/2024.06.01.596961v2 🧬🖥️
Solving genomic puzzles: computational methods for metagenomic binning Want to know more about finding #phage#bacteria#metagenomesacademic.oup.com/bib/article/...
Abstract. Metagenomics involves the study of genetic material obtained directly from communities of microorganisms living in natural environments. The fiel